Feb 01, 2016. OK, v1.07 is current PLINK 1.9 is now available! See above website for details Writing this text to log file plink.log Analysis started: Sat May 7 17: Options in effect: -file test ERROR: No file test.ped exists. MacBook-Pro-de-Pedro: Pedro$.
Current releases
SAMtools and BCFtools are distributed as individual packages.The code uses HTSlib internally, but these source packages contain their owncopies of htslib so they can be built independently.
HTSlib is also distributed as a separate package which can be installedif you are writing your own programs against the HTSlib API.HTSlib also provides the bgzip, htsfile, and tabix utilities,so you may also want to build and install HTSlib to get these utilities,or see the additional instructions in
INSTALL
to install them from asamtools or bcftools source package.![Plink software download Plink software download](/uploads/1/2/6/7/126785242/832483617.jpg)
Download current source releases: samtools-1.11 bcftools-1.11 htslib-1.11
Q see download software. See also release notes forsamtools,bcftools,and htslib.
New releases are announced on the samtools mailing lists and by @htslibon Twitter.Previous releases are available from thesamtools GitHub organisation(see samtools,bcftools,or htslib releases)or from thesamtools Sourceforge project.
Building and installing
![Mac Mac](/uploads/1/2/6/7/126785242/704012950.png)
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Building each desired package from source is very simple: Eset nod32 antivirus full.
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Play oregon trail online, free. See
INSTALL
in each of the source directories for further details.Plink V1.9
The executable programs will be installed to a
bin
subdirectory underyour specified prefix, so you may wish to add this directory to your $PATH:Historical SAMtools/BCFtools 0.1.x releases
Plink Software
Prior to the introduction of HTSlib, SAMtools and BCFtools were distributedin a single samtools-0.1.x package.These old versions remain available from the Sourceforge samtools project.